Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919051.1_cds_XP_016468334.1_60984
CDS Infomation

[gene=LOC107790879] [db_xref=GeneID:107790879] [protein=eukaryotic translation initiation factor 3 subunit J-A-like] [protein_id=XP_016468334.1] [location=complement(join(186350..186729,187738..187984,189947..190285))] [gbkey=CDS]
Sequence

ATGGTGGGAGGTGGAAACAGGAAGGACGAACAGTTGGTGATAAGCAACAATAACGTATTT
GCGGCACTTGGAACCCTAAGGAAGAAGAAGAAGTCTGATAAGGGGAAGAGCACTGAGGGT
TCATCTTCCAAAAATGTGAAGAAGCAGGCTGATAAGGAATCTGAGGCCGTTTTCTGGGCT
CCGGCACCATTGACTGTGAAATCATGGGCAGATGTTGATGATGAAGACGATGATGATTAT
TACGCTACTACGGCCCCTCCCCAGGCTGTTTGGGGAGCGGATTCTGCTGCTAACGAACAG
CATGACAAGCCAAAGGAAACTGTAACTCTTGATGTGGAGGAAAGTGAAAGTGAAGACGAA
GGCGTCGATGAAGCAGATGATGATAATGAGGAAGAACATGAGCAAGAACCTGATGTTCCA
GAGGAGAAAGAGCCAATTGTTAAGAAGCCTGCTGAAATAGTGGCACCCAAAGAGTCGGAA
AGGCAGCTTTCAAAGAAGGAACTTAAGAAAAAGGAACTTGCTGAGCTTGAAGCTATGCTT
GCTGAATTTGGATTAAACAAAACTGAGAGCAATGATGATTCACAAGGTGCTGCACAGGAT
AAGAAGGTGGAAAAACCCAATGGGGAGATGGCTAAGAAGGATGATAATACTCCCGGGGAG
AGCAAGAGTGCAAAGAAGAAGAAGAAGAAGGATAAATCATCAAAGGAGTCTAAGGAGCAA
CATGATCAACCCAATGGTGTTGAGGCTGGAAATGGGACCAATGAGACCGAGAAGGGAGAA
GATGCATCTACTTCTCTTGTGAAGGACAAGATAAAGAAAGTGGCATCTCTCAAGAAGAAA
AAATCAAGCAAGGAGGTAGATGCTGCCGCCAAAGCTGCGGCTAGTGAGGCTGCAGCAAGG
AATGCAAGGCTGGCTGCTGCAAAGAAAAAGGAGAAGAGCCATTACAACCAGCAGCCCCTG
CGGTGA

Peptide Sequence

PEP ID

XP_016468334.1
PEP Infomation

PREDICTED: eukaryotic translation initiation factor 3 subunit J-A-like [Nicotiana tabacum]
Sequence

MVGGGNRKDEQLVISNNNVFAALGTLRKKKKSDKGKSTEGSSSKNVKKQADKESEAVFWA
PAPLTVKSWADVDDEDDDDYYATTAPPQAVWGADSAANEQHDKPKETVTLDVEESESEDE
GVDEADDDNEEEHEQEPDVPEEKEPIVKKPAEIVAPKESERQLSKKELKKKELAELEAML
AEFGLNKTESNDDSQGAAQDKKVEKPNGEMAKKDDNTPGESKSAKKKKKKDKSSKESKEQ
HDQPNGVEAGNGTNETEKGEDASTSLVKDKIKKVASLKKKKSSKEVDAAAKAAASEAAAR
NARLAAAKKKEKSHYNQQPLR

Transcript Sequence

Gene sequence data has not been registered.